The detailed information of tRNA gene sequence


Sequence ID>C183003039
Genome IDCP027773
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesVariovorax sp. PMC12 [CP027773, CP027774]
Start position on genome 5642990
End posion on genome 5642915
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
ctgaggcttc
tRNA gene sequence 
GCCGGTGTAGCTCAGTCGGTAGAGCAGCTCATTCGTAATGAGAAGGTCGGGTGTTCGATT
CATCTCTCCGGCACCA
Downstream region at tRNA end position 
aaactaaaag
Secondary structure (Cloverleaf model)
>C183003039	Thr	CGT
                   c      ACCA aaactaaaag
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     T   T
                     G - C          T T
                    T     T C T A C     A
      T G A        A      + | + | |     G
    C       C T C G       G G G T G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G   A
                    C - G
                    T - A
                    C - G
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.-

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