The detailed information of tRNA gene sequence


Sequence ID>C183003639
Genome IDCP031165
Search identical group
Phylum/ClassActinomycetota
SpeciesEuzebya pacifica DY32-46 [CP031165]
Start position on genome 5001686
End posion on genome 5001779
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
cgacccccat
tRNA gene sequence 
GGGGGCGTCTGGGTTCCTGGTGGGCCCCACGGTCTTCAACACCGATGAGGGCGGCTCGGC
CGTCCTGGCGGGTTCGATTCCCGTCCGCCTCCGCtc
Downstream region at tRNA end position 
tcgtaccgcc
Secondary structure (Cloverleaf model)
>C183003639	SeC	TCA
                   t      GCtc tcgtaccgcc
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     C - G
                     G - C
                     T   C          T T
                    C     T G C C C     A
      C C T        T      + | | | |     G
    T       T G G G       G C G G G     C
    G       + | | |                 T T
    G       G C C C
      T G G        C     TGAGGGCGGCTCGGCCGTCCTG
                    A   A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       C
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.-

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