The detailed information of tRNA gene sequence


Sequence ID>C181000004
Genome IDAP014564
Search identical group
Phylum/ClassBacteroidota
SpeciesIchthyobacterium seriolicida JBKA-6 [AP014564]
Start position on genome 199101
End posion on genome 199188
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
agaatagtta
tRNA gene sequence 
GGAGAGGTGGTCGAGTGGTCTAAGGCGCACGCTTGGAAAGCGTGTATATGCGAAAGTGTA
TCAAGGGTTCGAATCCCTTTCTCTCCGCtg
Downstream region at tRNA end position 
tgttgtagta
Secondary structure (Cloverleaf model)
>C181000004	Ser	GGA
                   a      GCtg tgttgtagta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     T T C C C     A
      T G A        G      | | | | |     G
    G       G C T G       A A G G G     C
    G         | + |                 T T
    T       A G G C
      C T A        G     TATATGCGAAAGTGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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