The detailed information of tRNA gene sequence


Sequence ID>C181001077
Genome IDAP014946
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesVariibacter gotjawalensis GJW-30 [AP014946]
Start position on genome 1755353
End posion on genome 1755277
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgcgccggtt
tRNA gene sequence 
GGCGGGGTAGCTCAGTTGGTTAGAGCACGGGAATCATAATCCTGGGGTCGGGGGTTCAAA
TCCCTCCTCCGCTACCA
Downstream region at tRNA end position 
aacttccaga
Secondary structure (Cloverleaf model)
>C181001077	Met	CAT
                   t      ACCA aacttccaga
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     G + T
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    G + T
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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