The detailed information of tRNA gene sequence


Sequence ID>C181001079
Genome IDAP014946
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesVariibacter gotjawalensis GJW-30 [AP014946]
Start position on genome 1453761
End posion on genome 1453672
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgcgccgcac
tRNA gene sequence 
GGAGAGATGGCCGAGTGGCTTAAGGCGCTCGCTTGGAAAGCGTGTATACGGGAAACCGTA
TCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
tgtcttggtc
Secondary structure (Cloverleaf model)
>C181001079	Ser	GGA
                   c      GCCA tgtcttggtc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T T A        G     TATACGGGAAACCGTATC
                    C - G
                    T   T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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