The detailed information of tRNA gene sequence


Sequence ID>C181001535
Genome IDAP017368
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesCandidatus Desulfovibrio trichonymphae Rs-N31 [AP017368]
Start position on genome 140139
End posion on genome 140233
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gcagcagcac
tRNA gene sequence 
GGAGAGGTGTCCGAGTCGGCTGAAGGAGCTCGCCTGCTAAGCGAGTATACGGGCTTAAAC
CTGTATCCAGGGTTCAAATCCCTGCCTCTCCGCCA
Downstream region at tRNA end position 
attttaagtc
Secondary structure (Cloverleaf model)
>C181001535	Ser	GCT
                   c      GCCA attttaagtc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G T C C C     A
    C T G A        G      | | | | |     A
  G         G C C T       C A G G G     C
  G           | | |                 T T
  C         A G G A
    T G A          G     TATACGGGCTTAAACCTGTATC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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