The detailed information of tRNA gene sequence


Sequence ID>C181001538
Genome IDAP017368
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesCandidatus Desulfovibrio trichonymphae Rs-N31 [AP017368]
Start position on genome 341329
End posion on genome 341420
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
agcggaacat
tRNA gene sequence 
GGAGGGGTGGCAGAGTCCGGTTTATTGCACTGGTCTTGAAAACCAGCGAAGGTGGAAACC
TTCCGGGGGTTCGAATCCCTCCCCCTCCGCCA
Downstream region at tRNA end position 
aatttaagtc
Secondary structure (Cloverleaf model)
>C181001538	Ser	TGA
                   t      GCCA aatttaagtc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
    C T G A        G      | + | | |     G
  C         G A C G       G G G G G     C
  G         + | | |                 T T
  G         T T G C
    T T T A        A     CGAAGGTGGAAACCTTCC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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