The detailed information of tRNA gene sequence


Sequence ID>C181002283
Genome IDAP017572
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRickettsia japonica DT-1 [AP017572]
Start position on genome 726631
End posion on genome 726542
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gaatcttctt
tRNA gene sequence 
GGATAGGTGGCCGAGTGGTTTAAGGCACTAGTCTTGAAAACTGGCGTACGGGCAACCGTA
CCGTGGGTTCGAATCCCACCCTATCCGCCA
Downstream region at tRNA end position 
gctcagttta
Secondary structure (Cloverleaf model)
>C181002283	Ser	TGA
                   t      GCCA gctcagttta
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        A     CGTACGGGCAACCGTACC
                    C - G
                    T + G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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