The detailed information of tRNA gene sequence


Sequence ID>C181002347
Genome IDAP017574
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRickettsia japonica HH06154 [AP017574]
Start position on genome 834720
End posion on genome 834646
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ataaataatc
tRNA gene sequence 
GGGGGCATAGCTCAGGGGTAGAGCATCTGCTTTGCACGCAGAGGGTCAAGGGTTCGATTC
CCTTTGCCTCCACCA
Downstream region at tRNA end position 
cttccgataa
Secondary structure (Cloverleaf model)
>C181002347	Ala	TGC
                   c      ACCA cttccgataa
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     C - G
                     A - T          T T
                    T     T T C C C     A
        G A        A      | | | | |     G
      G     C T C G       A A G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.-

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