The detailed information of tRNA gene sequence


Sequence ID>C181002350
Genome IDAP017574
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRickettsia japonica HH06154 [AP017574]
Start position on genome 703945
End posion on genome 703858
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
taaaaatttg
tRNA gene sequence 
GGAGAGATGGCCGAGCGGTTTAAGGCGCACGCCTGGAAAGCGTGTTCACGGCAACGTGTC
GGGGGTTCGAATCCCCCTCTCTCCGCCA
Downstream region at tRNA end position 
gctcagttta
Secondary structure (Cloverleaf model)
>C181002350	Ser	GGA
                   g      GCCA gctcagttta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TTCACGGCAACGTGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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