The detailed information of tRNA gene sequence


Sequence ID>C181002366
Genome IDAP017575
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRickettsia japonica HH07124 [AP017575]
Start position on genome 787718
End posion on genome 787794
Amino Acid Arg
Anticodon ACG
Upstream region at tRNA start position 
tttaaactta
tRNA gene sequence 
GCACCCGTAGCTCAATTGGATAGAGTATATGACTACGGATCATAAGGTTAGGGGTTCGAC
TCCTCTCGGGTGCGCCA
Downstream region at tRNA end position 
tttttcaatt
Secondary structure (Cloverleaf model)
>C181002366	Arg	ACG
                   a      GCCA tttttcaatt
                     G - C
                     C - G
                     A - T
                     C - G
                     C - G
                     C - G
                     G - C          T C
                    T     T C T C C     A
      T A A        A      | | + | |     G
    T       C T C G       A G G G G     C
    G       | | | +                 T T
    G       G A G T
      A T A        A     AGGTT
                    T - A
                    A - T
                    T - A
                    G - C
                    A - T
                  C       A
                  T       G
                    A C G
Intron
Comment/Decision
Genome/Seq. Info.-

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