The detailed information of tRNA gene sequence


Sequence ID>C181002452
Genome IDAP017577
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRickettsia japonica MZ08014 [AP017577]
Start position on genome 216727
End posion on genome 216652
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
tcatatttca
tRNA gene sequence 
GCCGATGTAGCTCAGCTGGTAGAGCGGCGCATTCGTAATGCGTAGGTCTGGGGTTCAAAT
CCCCACATTGGCACCA
Downstream region at tRNA end position 
tcttctaaat
Secondary structure (Cloverleaf model)
>C181002452	Thr	CGT
                   a      ACCA tcttctaaat
                     G - C
                     C - G
                     C - G
                     G + T
                     A - T
                     T - A
                     G - C          T A
                    T     A C C C C     A
      C G A        A      | | | | |     A
    T       C T C G       T G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    G + T
                    C - G
                    G - C
                    C - G
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.-

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