The detailed information of tRNA gene sequence


Sequence ID>C181002549
Genome IDAP017580
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRickettsia japonica PO-1 [AP017580]
Start position on genome 696229
End posion on genome 696153
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
aaaattataa
tRNA gene sequence 
GGGTGATTAGCTCAGTTGGTTAGAGCATTACGTTGACATCGTAAAGGTCGGTGGTTCGAG
CCCACTATCACTCACCA
Downstream region at tRNA end position 
ttctccattt
Secondary structure (Cloverleaf model)
>C181002549	Val	GAC
                   a      ACCA ttctccattt
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C
                     A - T
                     T - A          C G
                    T     T C A C C     A
      T G A        A      + | | | |     G
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    T - A
                    T - A
                    A - T
                    C - G
                    G - C
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.-

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