The detailed information of tRNA gene sequence


Sequence ID>C181003370
Genome IDAP017896
Search identical group
Phylum/ClassActinomycetota
SpeciesActinomyces sp. Chiba101 [AP017896]
Start position on genome 107199
End posion on genome 107287
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cttcgcgtct
tRNA gene sequence 
GGAGACGTCGCATAGTGGCCTAGTGCGCCTCCCTGCTAAGGAGGTTGGGGTGGAAGCCCC
TCGGGGGTTCGAATCCCCCCGTCTCCGCCg
Downstream region at tRNA end position 
gacagccccg
Secondary structure (Cloverleaf model)
>C181003370	Ser	GCT
                   t      GCCg gacagccccg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C C C C C     A
      T G A        C      | | | | |     G
    G       T A C G       G G G G G     C
    G       + | | |                 T T
    C       G T G C
      C T A        G     TTGGGGTGGAAGCCCCTC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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