The detailed information of tRNA gene sequence


Sequence ID>C181010620
Genome IDCP011036
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPseudoalteromonas nigrifaciens KMM 661 [CP011036, CP011037]
Start position on genome 60431
End posion on genome 60339
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gttatgcgtt
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGCCGAAGGAGCTCCCCTGCTAAGGGAGTATAGAGTTTGTAGCT
CTATCGAGGGTTCGAATCCCTCCCTCTCCACCA
Downstream region at tRNA end position 
tacttaattt
Secondary structure (Cloverleaf model)
>C181010620	Ser	GCT
                   t      ACCA tacttaattt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    C       A G G A
      C G A        G     TATAGAGTTTGTAGCTCTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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