The detailed information of tRNA gene sequence


Sequence ID>C181011270
Genome IDCP011847
Search identical group
Phylum/ClassBacillota
SpeciesClostridioides difficile DSM 27639 [CP011847]
Start position on genome 135480
End posion on genome 135570
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gactgaattt
tRNA gene sequence 
GGAGAAGTACTCAAGTGGCTCAAGAGGATCCCCTGCTAAGGGATTAGGCTGGGTAACCGG
TGCGAGGGTTCGAATCCCTCCTTCTCCGCCA
Downstream region at tRNA end position 
ttcaaaaacg
Secondary structure (Cloverleaf model)
>C181011270	Ser	GCT
                   t      GCCA ttcaaaaacg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | | | | |     G
    G       A C T C       G A G G G     C
    G         | | |                 T T
    C       A G A G
      T C A        G     TAGGCTGGGTAACCGGTGC
                    A - T
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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