The detailed information of tRNA gene sequence


Sequence ID>C181019943
Genome IDCP016491
Search identical group
Phylum/ClassBacillota
SpeciesLactiplantibacillus pentosus BGM48 [CP016491]
Start position on genome 1406405
End posion on genome 1406494
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ggcccatttT
tRNA gene sequence 
GGAGAAGTACTCAAGTGGCTGAAGAGGTGCCCCTGCTAAGGGTATAGATCGCGCAAGCGG
TGCGAGGGTTCGAATCCCTCCTTCTCCGTtg
Downstream region at tRNA end position 
ttccatatta
Secondary structure (Cloverleaf model)
>C181019943	Ser	GCT
                   T      GTtg ttccatatta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | | | | |     G
    G       A C T C       G A G G G     C
    G         | | |                 T T
    C       A G A G
      T G A        G     TAGATCGCGCAAGCGGTGC
                    T - A
                    G + T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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