The detailed information of tRNA gene sequence


Sequence ID>W09109150
Genome IDABTW01000034
Search identical group
Phylum/ClassMyxococcota
SpeciesHaliangium ochraceum DSM 14365 [ABTW]
Start position on genome 22972
End posion on genome 22897
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
agtttctcga
tRNA gene sequence 
AGGGGCGTAGTTCAATTGGTAGAGCATCCGTCTCCAAAGCGGAGTGTTGGGGGTTCGAGT
CCCTCCGCCCCTGCCG
Downstream region at tRNA end position 
cgagcgagtt
Secondary structure (Cloverleaf model)
>W09109150	Trp	CCA
                   a      GCCG cgagcgagtt
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T T G       G G G G G     C
    G       | | + |                 T T
    G       G A G C
      T A          A     GTGTT
                    T - A
                    C - G
                    C - G
                    G - C
                    T + G
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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