The detailed information of tRNA gene sequence


Sequence ID>C181033339
Genome IDCP018799
Search identical group
Phylum/ClassZetaproteobacteria
SpeciesMariprofundus aestuarium CP-5 [CP018799]
Start position on genome 516932
End posion on genome 517008
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ttcaaatagg
tRNA gene sequence 
CGGGGTGTGGCGCAGCCTGGTAGCGCGTACCGTTCGGGACGGTAAGGCCGGAGGTTCGAA
TCCTCTCACCCCGACCA
Downstream region at tRNA end position 
tttcttttat
Secondary structure (Cloverleaf model)
>C181033339	Pro	CGG
                   g      ACCA tttcttttat
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T C T C C     A
      C G A        G      + | | | |     G
    C       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGCC
                    T - A
                    A - T
                    C - G
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.-

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