The detailed information of tRNA gene sequence


Sequence ID>C181033387
Genome IDCP018800
Search identical group
Phylum/ClassZetaproteobacteria
SpeciesMariprofundus ferrinatatus CP-8 [CP018800]
Start position on genome 111569
End posion on genome 111645
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cggaaacgac
tRNA gene sequence 
GGGCTCATGGCGCAATTGGTTAGCGCTACCGGCTCATAACCGGTTGGTTCCAGGTTCGAG
TCCTGGTGAGCCCACCA
Downstream region at tRNA end position 
gtttctgctg
Secondary structure (Cloverleaf model)
>C181033387	Met	CAT
                   c      ACCA gtttctgctg
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     A - T          T G
                    T     G G T C C     A
      T A A        G      | | | | |     G
    T       C G C G       C C A G G     C
    G       | | | |                 T T
    G       G C G C
      T T A        T     TGGTT
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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