The detailed information of tRNA gene sequence


Sequence ID>C181033895
Genome IDCP018890
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesBordetella holmesii [CP018890]
Start position on genome 6590
End posion on genome 6665
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tgaaagccat
tRNA gene sequence 
AGGGGTATAGCTCAATTGGCAGAGCGTCGGTCTCCAAAACCGAAGGTTGTAGGTTCGATT
CCTACTGCCCCTGCCA
Downstream region at tRNA end position 
ccacccgccg
Secondary structure (Cloverleaf model)
>C181033895	Trp	CCA
                   t      GCCA ccacccgccg
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          T T
                    T     C A T C C     A
      T A A        A      | | | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.-

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