The detailed information of tRNA gene sequence


Sequence ID>C181039139
Genome IDCP019797
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesStenotrophomonas acidaminiphila SUNEO [CP019797]
Start position on genome 2243514
End posion on genome 2243422
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gaaagaaaac
tRNA gene sequence 
GGAGTGATGCCCGAGAGGCCGAAGGGGCTCCCCTGCTAAGGGAGTATAGGGTCAAAAGCT
CTATCGAGGGTTCGAATCCCTCTCACTCCGCCA
Downstream region at tRNA end position 
gttgaagaac
Secondary structure (Cloverleaf model)
>C181039139	Ser	GCT
                   c      GCCA gttgaagaac
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     A - T          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C C       G A G G G     C
    G         | | |                 T T
    C       A G G G
      C G A        G     TATAGGGTCAAAAGCTCTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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