The detailed information of tRNA gene sequence


Sequence ID>C181043266
Genome IDCP020034
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesVibrio parahaemolyticus 20130629002S01 [CP020034, CP020035]
Start position on genome 2802823
End posion on genome 2802747
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cacgaactac
tRNA gene sequence 
AGGGGTGTAGCTCCAATTGGCAGAGCAGCGGATTCCAAATCCGCGTGTTGGGAGTTCGAA
TCTCTCCACCCCTGCCA
Downstream region at tRNA end position 
tatttaaagc
Secondary structure (Cloverleaf model)
>C181043266	Trp	CCA
                   c      GCCA tatttaaagc
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C T C T C     A
      A A C        A      | + | | |     G
    T       C T C G       G G G A G     C
    T       | | | |                 T T
    G       G A G C
      G C A        A     GTGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.-

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