The detailed information of tRNA gene sequence


Sequence ID>C181043269
Genome IDCP020034
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesVibrio parahaemolyticus 20130629002S01 [CP020034, CP020035]
Start position on genome 2223450
End posion on genome 2223363
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aatttgattc
tRNA gene sequence 
GGTGAGTTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATC
GAGAGTTCGAATCTCTCACTCACCGCCA
Downstream region at tRNA end position 
cattctaaag
Secondary structure (Cloverleaf model)
>C181043269	Ser	GGA
                   c      GCCA cattctaaag
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C T C T C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G A G     C
    G         | | |                 T T
    C       A G G A
      T G A        G     TATACGGCAACGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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