The detailed information of tRNA gene sequence


Sequence ID>C181049328
Genome IDCP021106
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesNitrosospira lacus APG3 [CP021106]
Start position on genome 539203
End posion on genome 539128
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
tgcagctatc
tRNA gene sequence 
GCCCTGGTAGCTCAGTGGATAGAGCAACCCCCTCCTAAGGGGTAGGTCACACGTTCGATT
CGTGTTCAGGGCGCCA
Downstream region at tRNA end position 
acgatactcg
Secondary structure (Cloverleaf model)
>C181049328	Arg	CCT
                   c      GCCA acgatactcg
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     G - C
                     G + T          T T
                    T     T G T G C     A
      T G A        A      | | | | |     G
    G       C T C G       A C A C G     C
    G       | | | |                 T T
    A       G A G C
      T A          A     AGGTC
                    A - T
                    C - G
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.-

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