The detailed information of tRNA gene sequence


Sequence ID>C181053388
Genome IDCP021646
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPseudoalteromonas piscicida DE2-B [CP021646, CP021647]
Start position on genome 541457
End posion on genome 541533
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tcgacattgc
tRNA gene sequence 
AGGGGCGTAGTTCCAATTGGTAGAACAGCGGTCTCCAAAACCGATGGTTGCGGGTTCGAG
TCCTGCCGCCCCTGCCA
Downstream region at tRNA end position 
cttcttattt
Secondary structure (Cloverleaf model)
>C181053388	Trp	CCA
                   c      GCCA cttcttattt
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C G T C C     A
      A A C        A      | | + | |     G
    T       C T T G       G C G G G     C
    T       | | | |                 T T
    G       G A A C
      G T A        A     TGGTT
                    G   A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.-

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