The detailed information of tRNA gene sequence


Sequence ID>C181057886
Genome IDCP022098
Search identical group
Phylum/ClassMyxococcota
SpeciesCystobacter fuscus DSM 52655 [CP022098]
Start position on genome 5444154
End posion on genome 5444059
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aatcgcgcgc
tRNA gene sequence 
GGTAGGACGTCTGGACCTGGTGGCTGGCCCGGTCTTCAAAACCGGTGGGGGGCATGGAGA
CATGTCCCCGGGAGGTTCGATTCCTCTGTCCTACCGtcc
Downstream region at tRNA end position 
cgttttctcc
Secondary structure (Cloverleaf model)
>C181057886	SeC	TCA
                   c      Gtcc cgttttctcc
                     G - C
                     G - C
                     T - A
                     A - T
                     G - C
                     G - C
                     A - T
                     C - G          T T
                    G     T C T C C     A
      C C A        T      + | | | |     G
    T       G G T C       G G A G G     C
    G       | + + |                 T T
    G       C T G G
      T G G        C     TGGGGGGCATGGAGACATGTCCCCG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.-

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