The detailed information of tRNA gene sequence


Sequence ID>C181058273
Genome IDCP022110
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesNitrospirillum amazonense CBAmc CBAmC [CP022110, CP022111, CP022112, CP022113]
Start position on genome 61718
End posion on genome 61809
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cattccggac
tRNA gene sequence 
GGAGGGGTGGCCGAGTGGTTGAAGGCGCTCGCCTGGAAAGCGGGTATACGGCCAAAACCG
TATCGTGGGTTCGAATCCCATCCCCTCCGCCA
Downstream region at tRNA end position 
ttttccctgt
Secondary structure (Cloverleaf model)
>C181058273	Ser	GGA
                   c      GCCA ttttccctgt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T A C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TATACGGCCAAAACCGTATC
                    C - G
                    T + G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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