The detailed information of tRNA gene sequence


Sequence ID>C181058286
Genome IDCP022110
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesNitrospirillum amazonense CBAmc CBAmC [CP022110, CP022111, CP022112, CP022113]
Start position on genome 1499411
End posion on genome 1499502
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gtcggtggac
tRNA gene sequence 
GGAGGGGTGGCCGAGTGGCTGAAGGCAACGGTTTGCTAAACCGTCGTACCGGGAAACTGG
TACCGTGGGTTCGAATCCCATCCCCTCCGCCA
Downstream region at tRNA end position 
tcacttagcg
Secondary structure (Cloverleaf model)
>C181058286	Ser	GCT
                   c      GCCA tcacttagcg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T A C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        A     CGTACCGGGAAACTGGTACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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