The detailed information of tRNA gene sequence


Sequence ID>C181058314
Genome IDCP022111
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesNitrospirillum amazonense CBAmc CBAmC [CP022110, CP022111, CP022112, CP022113]
Start position on genome 1148018
End posion on genome 1148092
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
cacgacggat
tRNA gene sequence 
GGGCGCGTAGCTCAGCGGGAGAGCATCGCCTTCACACGGCGGGGGTCGTAGGTTCAATCC
CTACCGCGCCCACCA
Downstream region at tRNA end position 
ttcgtcgaaa
Secondary structure (Cloverleaf model)
>C181058314	Val	CAC
                   t      ACCA ttcgtcgaaa
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          C T
                    T     C A T C C     A
        G A        A      | | | | |     A
      C     C T C G       G T A G G     C
      G     | | | |                 T T
      G     G A G C
        G A        A     GGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.-

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