The detailed information of tRNA gene sequence


Sequence ID>C181058318
Genome IDCP022111
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesNitrospirillum amazonense CBAmc CBAmC [CP022110, CP022111, CP022112, CP022113]
Start position on genome 1271546
End posion on genome 1271642
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tggtttataC
tRNA gene sequence 
GGAAGGGAATCGCCCCTGGTGGGGCGTCCGGACTTCAAATCCGGGTGGGGCAGCGAGACT
GTCCCGGGTGGGTTCGACTCCCATTCCCTTCCGCC
Downstream region at tRNA end position 
Atccctcaaa
Secondary structure (Cloverleaf model)
>C181058318	SeC	TCA
                   C      CGCC Atccctcaaa
                     G - C
                     G + T
                     A - T
                     A   C
                     G - C
                     G - C
                     G + T          T C
                    A     T A C C C     A
      C C C        A      + | | | |     G
    T       C G C T       G T G G G     C
    G       |     +                 T T
    G       G G C G
      T G G        T     GTGGGGCAGCGAGACTGTCCCGG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.-

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