The detailed information of tRNA gene sequence


Sequence ID>C181060525
Genome IDCP022189
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesAlloyangia pacifica YSBP01 [CP022189, CP022190]
Start position on genome 1062960
End posion on genome 1063049
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cggtcgaacc
tRNA gene sequence 
GGAGGTTTGGCAGAGTGGTCGAATGCGGCGGTCTTGAAAACCGTTGGGCCTTTGCGGGTC
CCGTGGGTTCGAATCCCACAGCCTCCGCCA
Downstream region at tRNA end position 
tgttttttcc
Secondary structure (Cloverleaf model)
>C181060525	Ser	TGA
                   c      GCCA tgttttttcc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T + G
                     T - A          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G T G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     TGGGCCTTTGCGGGTCCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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