The detailed information of tRNA gene sequence


Sequence ID>C181060559
Genome IDCP022190
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesAlloyangia pacifica YSBP01 [CP022189, CP022190]
Start position on genome 1107452
End posion on genome 1107363
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
agcggtccgc
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTCGAAGGCGCACGCCTGGAAAGTGTGTAGGCGGGGAACCGTC
TCGAGGGTTCGAATCCCTTCCTCTCCGCCA
Downstream region at tRNA end position 
cttgcacatc
Secondary structure (Cloverleaf model)
>C181060559	Ser	GGA
                   c      GCCA cttgcacatc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TAGGCGGGGAACCGTCTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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