The detailed information of tRNA gene sequence


Sequence ID>C181063198
Genome IDCP022372
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesBosea sp. AS-1 [CP022372]
Start position on genome 3818120
End posion on genome 3818216
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tgatgcccga
tRNA gene sequence 
TGGAGGAGAAGCGTCCCCGGTGGGGCGTCCGGACTTCAAATCCGGGAGGGGCCGTCAGAC
GGTCTCTGGTGGGTTCGACTCCCATTCTCTTCCGCCAc
Downstream region at tRNA end position 
ttccctgagg
Secondary structure (Cloverleaf model)
>C181063198	SeC	TCA
                   a      CCAc ttccctgagg
                     T + G
                     G - C
                     G - C
                     A - T
                     G + T
                     G - C
                     A - T          C C
                    G     C T T A C     T
    C C C T        A      | + + |       C
  C         G C G A       G G G T T     A
  G           | |                   C G
  G         G G C G
    T G G          T     GAGGGGCCGTCAGACGGTCTCTGGT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.-

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