The detailed information of tRNA gene sequence


Sequence ID>C181064478
Genome IDCP022415
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesPseudosulfitobacter pseudonitzschiae SMR1 [CP022415]
Start position on genome 925069
End posion on genome 925158
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
caccccagtc
tRNA gene sequence 
GGAGGAGTGGCAGAGTGGTCGAATGCACCGGTCTTGAAAACCGACGAGGGTGAAAGTCCT
CCGTGGGTTCGAATCCCACCTCCTCCGCCA
Downstream region at tRNA end position 
tgggcattta
Secondary structure (Cloverleaf model)
>C181064478	Ser	TGA
                   c      GCCA tgggcattta
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G T G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        A     CGAGGGTGAAAGTCCTCC
                    C   A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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