The detailed information of tRNA gene sequence


Sequence ID>C181069693
Genome IDCP022604
Search identical group
Phylum/ClassAlphaproteobacteria
Species[Ochrobactrum] quorumnocens A44 [CP022603, CP022604]
Start position on genome 1722744
End posion on genome 1722820
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgcaatgtgt
tRNA gene sequence 
GGCGGAGTAGCTCAGTAGGTTAGAGCAGAGGAATCATAATCCTTGTGTCGGCGGTTCGAA
TCCGTCCTCCGCTACCA
Downstream region at tRNA end position 
tcacttcact
Secondary structure (Cloverleaf model)
>C181069693	Met	CAT
                   t      ACCA tcacttcact
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C T G C C     A
      T G A        A      | + | | |     G
    A       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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