The detailed information of tRNA gene sequence


Sequence ID>C181074134
Genome IDCP022928
Search identical group
Phylum/ClassMycoplasmatota
SpeciesCandidatus Spiroplasma holothuricola [CP022928, CP022929]
Start position on genome 120952
End posion on genome 121042
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
attgtgatcc
tRNA gene sequence 
GGAGACATACCCAAGTCTGGTTGAAGGGAACTGTCTTGAAAACAGTCAGGCGTTAACGCG
CGCGGGGGTTCGAATCCCTCTGTCTCCGCCA
Downstream region at tRNA end position 
ttttttgtta
Secondary structure (Cloverleaf model)
>C181074134	Ser	TGA
                   c      GCCA ttttttgtta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     A - T          T A
                    T     C T C C C     A
    C T G A        A      | + | | |     G
  T         A C C C       G G G G G     C
  G           | | |                 T T
  G         A G G G
    T T G A        A     CAGGCGTTAACGCGCGC
                    A - T
                    C - G
                    T - A
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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