The detailed information of tRNA gene sequence


Sequence ID>C181080545
Genome IDCP023398
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPseudoalteromonas spongiae SAO4-4 [CP023398, CP023399]
Start position on genome 1958351
End posion on genome 1958426
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
aatctataat
tRNA gene sequence 
GGGTCGTTAGCTCAGTTGGGAGAGCATCGCCCTTACAAGGCGAGGGTCACTGGTTCAAGT
CCAGTACGACCCACCA
Downstream region at tRNA end position 
ttatagaata
Secondary structure (Cloverleaf model)
>C181080545	Val	TAC
                   t      ACCA ttatagaata
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C
                     T - A          T G
                    T     T G A C C     A
      T G A        A      | | | | |     A
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.-

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