The detailed information of tRNA gene sequence


Sequence ID>C181080548
Genome IDCP023398
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPseudoalteromonas spongiae SAO4-4 [CP023398, CP023399]
Start position on genome 2856860
End posion on genome 2856936
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgtcttaaat
tRNA gene sequence 
GGCCCTATAGCTCAGTTGGTTAGAGCACACGACTCATAATCGTTAGGTCCCTGGTTCGAG
TCCAGGTGGGGCCACCA
Downstream region at tRNA end position 
ttttattatt
Secondary structure (Cloverleaf model)
>C181080548	Met	CAT
                   t      ACCA ttttattatt
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T + G
                     A - T          T G
                    T     G G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    C   T
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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