The detailed information of tRNA gene sequence


Sequence ID>C181097279
Genome IDCP024199
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesThalassospira marina CSC3H3 [CP024199]
Start position on genome 196202
End posion on genome 196278
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctcccaccaa
tRNA gene sequence 
CGCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCGTCAGTTCAAA
TCTGGCCCCCGCAACCA
Downstream region at tRNA end position 
aaaacgtcaa
Secondary structure (Cloverleaf model)
>C181097279	Met	CAT
                   a      ACCA aaaacgtcaa
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G G T C     A
      C G A        G      | + | | |     A
    C       C G A G       G T C A G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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