The detailed information of tRNA gene sequence


Sequence ID>C181097296
Genome IDCP024199
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesThalassospira marina CSC3H3 [CP024199]
Start position on genome 2653888
End posion on genome 2653964
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
ttgccgttta
tRNA gene sequence 
GGGCGTATAGCTCAGTTGGTTAGAGCGTTCCCTTCACACGGGAGAGGTCACAAGTTCGAA
TCTTGTTACGCCCACCA
Downstream region at tRNA end position 
ttttccgcat
Secondary structure (Cloverleaf model)
>C181097296	Val	CAC
                   a      ACCA ttttccgcat
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     A - T          T A
                    T     T G T T C     A
      T G A        A      | | | | |     G
    T       C T C G       A C A A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T + G
                    T - A
                    C - G
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.-

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