The detailed information of tRNA gene sequence


Sequence ID>C181097302
Genome IDCP024199
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesThalassospira marina CSC3H3 [CP024199]
Start position on genome 3439872
End posion on genome 3439961
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ccacacatgc
tRNA gene sequence 
GGAGAGGTGCCGGAGTGGTCGAACGGGGCGGTCTCGAAAACCGTTGTACTAGCAATAGTA
CCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
ttttccgaag
Secondary structure (Cloverleaf model)
>C181097302	Ser	CGA
                   c      GCCA ttttccgaag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G G C C       G T G G G     C
    G         | | |                 T T
    T       A C G G
      C G A        G     TGTACTAGCAATAGTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.-

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