The detailed information of tRNA gene sequence


Sequence ID>C181102658
Genome IDCP024608
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesMassilia violaceinigra B2 [CP024608]
Start position on genome 795795
End posion on genome 795870
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
agttttacgt
tRNA gene sequence 
AGGGACGTAGCTCAATTGGCAGAGCGTCGGTCTCCAAAACCGAAGGTTGGGGGTTCGATG
CCCTCCGTCCCTGCCA
Downstream region at tRNA end position 
ccgttctggt
Secondary structure (Cloverleaf model)
>C181102658	Trp	CCA
                   t      GCCA ccgttctggt
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          G T
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.-

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