The detailed information of tRNA gene sequence


Sequence ID>C181102699
Genome IDCP024608
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesMassilia violaceinigra B2 [CP024608]
Start position on genome 6313107
End posion on genome 6313016
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aggccagaat
tRNA gene sequence 
GGAGACGTGGCCGAGTGGCCGAAGGCACGTCCCTGCTAAGGACGCATATGGGGTAACCTG
TATCGTGAGTTCGAATCTCACCGTCTCCGCCA
Downstream region at tRNA end position 
aaattctgtc
Secondary structure (Cloverleaf model)
>C181102699	Ser	GCT
                   t      GCCA aaattctgtc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G A G     C
    G         | | |                 T T
    C       A G G C
      C G A        A     CATATGGGGTAACCTGTATC
                    C - G
                    G - C
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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