The detailed information of tRNA gene sequence


Sequence ID>C181102727
Genome IDCP024608
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesMassilia violaceinigra B2 [CP024608]
Start position on genome 562258
End posion on genome 562183
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tccaggcact
tRNA gene sequence 
ATCTCAGTGGCGCAATTGGCAGCGCAGCGGTCTCCAAAACCGAAGGCTGAAGGTTCGACT
CCTTCCTGGGATGCCA
Downstream region at tRNA end position 
tttttacgtg
Secondary structure (Cloverleaf model)
>C181102727	Trp	CCA
                   t      GCCA tttttacgtg
                     A - T
                     T - A
                     C - G
                     T + G
                     C - G
                     A - T
                     G - C          T C
                    T     C T T C C     A
      T A A        G      | | | | |     G
    T       C G C G       G A A G G     C
    G       | | | |                 T T
    G       G C G C
      C A          A     AGGCT
                    G   A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.-

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