The detailed information of tRNA gene sequence


Sequence ID>C181104961
Genome IDCP024744
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Hodgkinia cicadicola TETLIM5 [CP024744]
Start position on genome 1581
End posion on genome 1652
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
attaaaacga
tRNA gene sequence 
GGGGCTGTAACTTAATTGGTAGAGTGTTTGGTTGCAACCAAAACGTCAGCGGTTCAAGTC
CGCTTGGCTCCAatt
Downstream region at tRNA end position 
tttgtgtgca
Secondary structure (Cloverleaf model)
>C181104961	Cys	GCA
                   a      Aatt tttgtgtgca
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T + G
                     G + T          T G
                    T     T C G C C     A
      T A A        A      | | | | |     A
    T       T T C A       A G C G G     C
    G       + | | |                 T T
    G       G A G T
      T A          G     CGTC
                    T - A
                    T - A
                    T - A
                    G   A
                    G - C
                  T       C
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.-

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