The detailed information of tRNA gene sequence


Sequence ID>C181104963
Genome IDCP024745
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Hodgkinia cicadicola TETLIM4 [CP024745]
Start position on genome 66228
End posion on genome 66299
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
atagcgttat
tRNA gene sequence 
GGTTTTGTGGTATAATGGTGATTACGCGGGACTGCAGATCCTGTAATCTCGGTTCGAGTC
TGAGCGAAGCCTttg
Downstream region at tRNA end position 
tatactaacg
Secondary structure (Cloverleaf model)
>C181104963	Cys	GCA
                   t      Tttg tatactaacg
                     G - C
                     G - C
                     T + G
                     T - A
                     T - A
                     T + G
                     G - C          T G
                    T     G A G T C     A
      T A A        G      | | | + |     G
    G       T A T G       C T C G G     C
    G         | | |                 T T
    T       T T A C
      G A          G     TAAT
                    C - G
                    G + T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.-

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