The detailed information of tRNA gene sequence


Sequence ID>C181104972
Genome IDCP024748
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Hodgkinia cicadicola TETLIM1 [CP024748]
Start position on genome 96177
End posion on genome 96249
Amino Acid Sup
Anticodon TCA
Upstream region at tRNA start position 
gccgtttgct
tRNA gene sequence 
tGAGGGCATAGCTTAGGCGGTAAAGCAACGGTCTTCAAAACCGTAGATGTAGGTTCAATT
CCTATTGTCCTCGCttt
Downstream region at tRNA end position 
ctgttgtaac
Secondary structure (Cloverleaf model)
>C181104972	Sup	TCA
                   t      Cttt ctgttgtaac
                     t + G
                     G - C
                     A - T
                     G - C
                     G - C
                     G + T
                     C - G
                     A - T          T T
                    T     T A T C C     A
      G G A        A      + | | | |     A
    C       T T C G       G T A G G     C
    G       | | | |                 T T
    G       A A G C
      T A          A     AGAT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.-

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