The detailed information of tRNA gene sequence


Sequence ID>C181108279
Genome IDCP024905
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesParaburkholderia caledonica PHRS4 [CP024905, CP024906]
Start position on genome 2754809
End posion on genome 2754733
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
gccgaccttt
tRNA gene sequence 
GCGGCGGTAGCTCAATTGGATAGAGCACAGGTCTTCTAAACCTGAGGTTGTGAGTTCGAT
CCTCGCCCGCCGCGCCA
Downstream region at tRNA end position 
ttgcccgcat
Secondary structure (Cloverleaf model)
>C181108279	Arg	TCT
                   t      GCCA ttgcccgcat
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C          C T
                    T     C G C T C     A
      T A A        A      | + | | |     G
    T       C T C G       G T G A G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGTT
                    C - G
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.-

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