The detailed information of tRNA gene sequence


Sequence ID>C181109133
Genome IDCP024941
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesParaburkholderia terricola mHS1 [CP024941, CP024942]
Start position on genome 3157697
End posion on genome 3157786
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tttgcggctt
tRNA gene sequence 
GGAGGTGTGGCCGAGCGGTTTAAGGCACCGGTCTTGAAAACCGGCGAAGGAGCAATCTTT
CCGTGAGTTCGAATCTCACCGCCTCCGCCA
Downstream region at tRNA end position 
gatcatcaat
Secondary structure (Cloverleaf model)
>C181109133	Ser	TGA
                   t      GCCA gatcatcaat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T + G
                     G - C          T A
                    T     C A C T C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G A G     C
    G         | | |                 T T
    T       A G G C
      T T A        A     CGAAGGAGCAATCTTTCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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